BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013H10SP1|AL426609
(828 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1511 1569 0.0
>3x_Contig1511
Length = 8569
Score = 1569 bits (787), Expect = 0.0
Identities = 810/819 (98%), Gaps = 2/819 (0%)
Strand = Plus / Minus
Query: 10 ggtaaacgaatagcaccaaatttcttcagtactgcgttcggttcaatcggagctggatac 69
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7906 ggtaaacgtatagcaccaaatttcttcagtactgcgttcggttcaatcggagctggatac 7847
Query: 70 tacatgaaaaakactggccgttactacgggttcctattgawatttaccggtctaatggtc 129
||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 7846 tacatgaaaaagactggccgttactacgggttcctattgaaatttaccggtctaatggtc 7787
Query: 130 cttgggcaactacaagtgttgctaatgaagcccgatatcagcacatggagacagtacatc 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7786 cttgggcaactacaagtgttgctaatgaagcccgatatcagcacatggagacagtacatc 7727
Query: 190 ttgctcccattacctcactttggatcttctgtcttgataacggttacacttcttgccatg 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7726 ttgctcccattacctcactttggatcttctgtcttgataacggttacacttcttgccatg 7667
Query: 250 attgcwgcggttccacatgaacaccaagccgctaccacgtcaatttcctacgctttcaga 309
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7666 attgcagcggttccacatgaacaccaagccgctaccacgtcaatttcctacgctttcaga 7607
Query: 310 tcaactggtagtacacttggtgtgtccgtag-cgctgctttgttcagaaacaagctctct 368
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 7606 tcaactggtagtacacttggtgtgtccgtaggcgctgctttgttcagaaacaagctctct 7547
Query: 369 ggatcattgtttgattctgtcatgaaattcgaatcggacaaatactccaaggaatatcta 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7546 ggatcattgtttgattctgtcatgaaattcgaatcggacaaatactccaaggaatatcta 7487
Query: 429 ctatctattatwaagcaagcwagtkaatcctctgaatacgtccatgccaacgcaccgaaa 488
||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 7486 ctatctattataaagcaagcaagtgaatcctctgaatacgtccatgccaacgcaccgaaa 7427
Query: 489 tttatccaggccactttgattcaatgttacgagcaagcttgcaaatcaacattcgcattc 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7426 tttatccaggccactttgattcaatgttacgagcaagcttgcaaatcaacattcgcattc 7367
Query: 549 tgtttcctaatttcgattttcgcttggatttcttgcggagtaatcaaggaatacaaacta 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7366 tgtttcctaatttcgattttcgcttggatttcttgcggagtaatcaaggaatacaaacta 7307
Query: 609 catacctcgatggaacgcaaatagtgatgtggaccaccgttgcaatttttcaccttcaac 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7306 catacctcgatggaacgcaaatagtgatgtggaccaccgttgcaatttttcaccttcaac 7247
Query: 669 attgttggagaactaacatatagatacagagatattcataacctactctaacaaaaatgc 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7246 attgttggagaactaacatatagatacagagatattcataacctactctaacaaaaatgc 7187
Query: 729 tccgaaacgcacgaaaactattcttcctaactttttttttcctatctgtataattgaaag 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7186 tccgaaacgcacgaaaactattcttcctaactttttttttcctatctgtataattgaaag 7127
Query: 789 ta-cctgatcaacgttaagccagccaaactatcgcccgt 826
|| ||||||||||||||||||||||||||||||||||||
Sbjct: 7126 taccctgatcaacgttaagccagccaaactatcgcccgt 7088
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5305
Number of Sequences: 1807
Number of extensions: 5305
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 828
length of database: 10,358,551
effective HSP length: 16
effective length of query: 812
effective length of database: 10,329,639
effective search space: 8387666868
effective search space used: 8387666868
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)